Free guide · 10
Everything here is free, with nothing gated: what Skills are, and the one folder that makes them sound like you.
Everyone says mastery takes ten thousand hours.
You do not have to spend yours. Not because there is a shortcut, but because you are not the one who has to master it anymore. Claude is. A Skill is how the hours get handed over, and a folder is what makes them yours.
Everything on this page is free, with nothing gated and nothing to buy. It comes in two pieces, built to work together.
The first piece is Skills. A Skill teaches Claude to do one job the way an expert would, every time, without you re-explaining it.
The second piece is context, and that is the Company Brain. It is the half most people skip. A Skill running against a folder that knows nothing about you produces exactly the generic output people blame the tool for. The same Skill running against a folder that knows how you make money, who buys from you, and what you sound like produces something you would actually send. The tool did not change. What changed was what it knew.
So: understand the Skills, then give them a business to work in. This page walks both, in that order, and ends with one prompt that builds the whole folder structure for you.
One prerequisite for all of it: Claude Code. If you do not have it yet, it is a ten-minute install and everything below runs inside it.
About ten minutes to the first working result, and roughly ninety minutes for the full build. You do not have to do it in one sitting, and nothing here expires.
You can read all of this yourself. You do not have to.
The fastest way through is to give this page to the thing it is about. Paste the block below into Claude Code and it will read the guide, check what you already have, install only what is missing, and then conduct the whole setup with you.
Read https://go.alc-he-mix.net/guides/company-brain/ end to end, then run it with me. In this order: 1. Tell me in five lines what we are about to build and what I will have when we are done. 2. Audit before you touch anything. Is Claude Code set up? Does a Company Brain already exist anywhere you can see: any folder with a soul.md next to a company-brain.md, under any name? Report both back to me before doing anything else. 3. Install only what step 2 found missing, asking me before each one. If a brain already exists, we build on that one. Never a second. 4. Then run the setup prompt from that page, in full, as written. You are the conductor. I answer and approve. While you do it: confirm before writing any file, never delete anything, never send or publish anything without my explicit go, and if the page and my machine disagree, stop and ask me rather than guessing. Start with step 1.
Step two is the part worth keeping. It audits your machine before it installs anything, so a returning reader never rebuilds something they already have, and the very first thing you see is a status report about your own setup rather than another wall of text.
Want to skip the guide entirely? The setup prompt on its own is available as a plain text file, ready to download at the bottom of this page. It is the same prompt this page carries further down.
Everything below explains what that prompt is doing and why each part of it is written the way it is. Worth reading eventually. Not worth waiting on.
Before any of the steps, here is the whole thing on one screen. This is the folder:
Company-Brain-Atlas/ ├── soul.md ├── company-brain.md ├── CLAUDE.md │ ├── Company/ │ ├── skills/ │ ├── faq.md │ └── connectors.md │ ├── People/ ├── AI-Team/ ├── Private/ ├── Daily-Notes/ └── Archive/
| File or folder | What it is for |
|---|---|
soul.md | Who you are, your voice, your red lines |
company-brain.md | Your Chief of Staff's charter, and the map |
CLAUDE.md | The rules it loads every session |
Company/ | Shared ground: playbooks, SOPs, roles, standing rules |
Company/skills/ | The jobs it can run |
Company/faq.md | Questions nobody could answer yet |
Company/connectors.md | The live systems it is allowed to reach |
People/ | One desk per human: their charter, notes, calls |
AI-Team/ | The AI specialists you hire, one lane each |
Private/ | Owner only |
Daily-Notes/ | What happened, written live |
Archive/ | Superseded, kept, never deleted |
And this is the sequence the whole system runs on, in five steps:
A folder → that knows you → specialists that do the jobs → connected to tools that reach the outside → running on a schedule without you.
Almost everyone jumps to step five and then wonders why the output sounds like nobody in particular. The order is the entire trick. Steps one and two are what make three, four and five sound like your business instead of like everybody else's, and they are the two steps you cannot buy.
That second half is the part that compounds. The model arrives on day one as a brilliant generalist with zero knowledge of you, your company, your clients, your voice, your standards, or your pricing floors. You would never hand a new hire a task on their first morning without an orientation. Most people do it to their AI every single day, then blame the output.
A Skill is a folder with a markdown file in it that teaches Claude how to do one job the way you want it done. That is the whole technology.
It is not code and it is not a plugin in the software sense. It is written instructions: when to use this, what good looks like, what to avoid, what steps to follow. Saved somewhere Claude can find it. When the job comes up, Claude loads that file and follows it. Every time, identically, without you re-explaining.
This is why the ten thousand hours matter. Someone who has done a job a thousand times knows things that never make it into a brief: the order that works, the mistake everyone makes the first time, the thing to check before shipping. Written into a Skill, those hours stop being theirs and start being available. You are not learning what they know. You are installing it.
Three things follow from that, and they shape everything below:
Company/skills/ tier waiting.A Company Brain is a folder your AI reads before every task, containing your identity, your voice, your operating rules, your clients, your playbooks, and a running log of what happened.
It is not a chatbot, a database, or a piece of software you buy. It is markdown files in a folder you own. That matters more than it sounds: files open in anything, sync anywhere, and survive every model release. Whatever you are running next year, they will still open.
Two ideas sit underneath it.
Your AI Chief of Staff is a teammate, not a tool. It has perfect memory, no calendar and no time zone, and infinite patience for the same question asked five times. It has exactly one limitation that matters: it only knows what you tell it. The Company Brain is how you tell it.
The folder is the asset. Models change, connectors change, entire products get retired. The context you captured about how your business actually works does not. Build for the folder.
Better prompts have a ceiling. Better context does not.
In a June 2025 keynote at Y Combinator, Andrej Karpathy lays out three eras of software: Software 1.0 is code you write, Software 2.0 is neural network weights you train, and Software 3.0 is prompts written in plain English. Under that framing, your soul file and your operating rules are not notes about a program. They are the program. Every file you add is a line of software that changes what the machine does on every future run.
This is also why the phrase that matters is context engineering, not prompt engineering. A prompt is a single instruction that dies with the tab. Context is a structure the model reads every time. One is a sentence, the other is an environment.
Ask Claude to write a post about your business before you have built any of this, and keep the output. At the end of this page, ask it for the same thing again. Same request, different business underneath it. That difference is the entire argument, and you do not have to take anyone's word for it.
You need three things, about ten minutes total: a Claude account (Pro, Max, Team, Enterprise, or Console), an empty folder where the brain will live, and a terminal. On Mac the terminal is Terminal, on Windows it is PowerShell. It is a plain text window where you type a command and press Enter. That is the whole tool.
Do not create anything inside the folder. The prompt does that.
Claude Code is where this works best, because it reads and writes real files on your machine at full speed and because scheduled tasks run there. Install takes about two minutes.
curl -fsSL https://claude.ai/install.sh | bash
irm https://claude.ai/install.ps1 | iex
Text scrolls for a minute or two. When it stops, close the terminal, open a new one, and type:
claude --version
You should see a version number. If you get "command not found," close and reopen the terminal once more and try again.
Now point it at your folder. Type cd followed by a space, then drag your folder from Finder or File Explorer straight into the terminal window. It fills in the location for you. Press Enter, then type:
claude
First run opens your browser to sign in, once. Claude will ask whether you trust the files in this folder. Say yes; it is your own.
Then set your permissions, before anything else. This is the single highest-leverage thing you do in the first ten minutes:
From now on you can read anything in this folder without asking. Always confirm before writing.
Allow reads broadly, gate every write. Approving every folder listing kills the flow and teaches you to click yes without reading. Approving every write is the entire point. Boris Cherny, who created Claude Code at Anthropic, puts one-time environment setup at the top of his own list of practical tips for exactly this reason: get the permissions right once and you stop thinking about them.
One more habit worth turning on now. Enable dictation and speak your prompts rather than typing them. On Mac: System Settings, Accessibility, Dictation, then double-tap the dictation key. On Windows: Win+H. You will naturally give far more context out loud than you would ever type, and specificity is what the model rewards.
The brain is one folder that three different things look at, and none of them is a copy.
Drive is already syncing this folder, so you do not need Obsidian's paid sync on top of it, and you should not run both. Two sync engines watching the same files will eventually write at the same moment and leave you conflict copies to reconcile by hand. Pick one, Drive, since it is doing the permissions job as well, and let Obsidian be a reader and editor of files it does not have to move.
The progression, deliberately in this order:
| Stage | What you add | Why now |
|---|---|---|
| 1. Solo and local | A folder on your machine, nothing else | Fastest, zero setup, and the milestone that matters is selfish: make it undeniably useful for you before anyone else touches it |
| 2. Durable | Drive for desktop, free Google account, folder in My Drive | The brain outlives the laptop and becomes reachable from your other machines |
| 3. Visible | Obsidian pointed at the same folder | You can finally see the shape of what you have built |
| 4. Shared | Google Workspace with a Shared Drive, tiers set by group | Only when someone else is actually joining. Permissions are their own session, never mixed into the build |
You can start at stage one today and never leave it. A solo operator with a local folder has a working Company Brain. Everything above stage one is about durability and other people, not about whether it works.
Here is the whole setup. Paste this into Claude Code, in your empty folder, and answer the questions.
It builds the structure, interviews you, drafts your identity file, names your Chief of Staff, sets up your daily rhythms, and ends by proposing a better architecture than the one it started with. You approve; it does the work.
Two things in it are worth understanding before you paste, because they are the two places this goes wrong for people.
It opens with RULE ZERO: one brain only. Before it creates anything it looks for a brain that already exists, and if it finds one it builds on that instead. This sounds like a technicality and it is the most important rule in the whole system. The failure mode is not losing a folder, it is quietly ending up with two, each holding half the truth, neither of them wrong enough to notice. Reconciling that later costs more than every convenience that created it. Fold, never fork.
It asks you HARVEST or INTERVIEW first. If you have been running the business for a while and have folders full of proposals, notes, and documents, choose HARVEST and let it read your own material. That is most people. Choose INTERVIEW only if you are genuinely starting from nothing. If you are unsure, pick HARVEST; the worst case is that it finds little and falls back to asking you the same five questions anyway.
You are my AI Chief of Staff and onboarding conductor. We are building my Company
Brain: the folder you will read before doing any work for me, forever. Conduct
this whole setup. I answer and approve; you do the work.
RULE ZERO: ONE BRAIN ONLY. Before you create anything, look around. If a Company
Brain already exists anywhere you can see (any folder holding a soul.md alongside
a company-brain.md, whatever it is named), we build on THAT one: adopt it, fill in
what is missing in place, and never scaffold a second brain, a duplicate folder
tree, or copies of files that already exist. If you find two candidates, stop and
ask me which is canonical before touching either. Fold, never fork.
First question to me: which path fits?
- HARVEST (I already run a business with folders full of context): I will point
you at my existing folders. Index everything into Company/sources-map.md, one
row per source, asking me one question at a time when a folder's purpose is not
obvious. Then DRAFT my soul.md and my ownership picture from my own documents
(holdco, entities, locations, whatever is actually real). Tag every claim
CONFIRMED or INFERRED, then walk me through the INFERRED list so I can correct
it. After that we run the migration sweep, one approved branch at a time.
- INTERVIEW (starting fresh): ask me the five soul questions, one at a time, and
capture my answers live: who I am and how the business is owned · what I sell,
in my words · my voice (I will paste real lines I have written) · what this
business is NOT · my red lines.
Ask which path, then run the modules below in order, one gate at a time. Do not
run ahead.
MODULE 0: BUILD THE SHELL. Create Company-Brain-Atlas/ here, with these tiers.
Write a one-paragraph README in every folder you create: what it is and why it
exists. A folder name alone carries no meaning.
- Root files: CLAUDE.md (how the brain operates every session: the boot order,
the filing rules, the gates) · soul.md (identity and voice, the protected
heart) · company-brain.md (your charter plus the INDEX, which is the map of
everything).
- Company/: everything shared: Playbooks/ (how we do things) · SOPs/ (how we
build things) · roles/ (what each seat owns) · standing-rules/ (corrections
that became law) · skills/ (the jobs you can run) · faq.md (the question
inbox) · sources-map.md (where knowledge actually lives) · connectors.md
(which live systems you reach and how) · Transcript-Vault/ (call recordings,
stored once) · Vendors/.
- People/: one folder per human, their desk. Each holds my-charter.md, their own
daily-notes/, and calls/. Scoped to that person and me. It is a desk, not
surveillance.
- AI-Team/: the AI employees you hire under you, one folder each, plus
hiring-protocol.md. This is the AI half of my org chart.
- Private/: mine only. Payroll, banking, personnel matters, anything walled.
Naming the exclusion is how everyone trusts the rest.
- Daily-Notes/: one file per working day, YYYY-MM-DD.md, written live and
append-only.
- Archive/: superseded material, kept. Never deleted.
Then show me the tree before you fill anything.
MODULE 1: THE SOUL. Run the path I chose. Read soul.md back to me in full.
Nothing else gets built until I say CONFIRMED. Stamp it with the date I confirmed.
MODULE 2: YOU. Three things, in this order:
1. Name. Atlas is the default. I may pick anything; it is how I will address you
from now on.
2. Charter, written into company-brain.md from three answers: my GOAL (the one
thing I would hand off tomorrow), my ORG CHART (who is on the team today,
human and AI, and who owns what), and my BOTTLENECK (where the work chokes).
From those, write your operating rules, the seats, and name the first
specialist you would hire against the bottleneck.
3. The one door. Save a skill in my Claude Code workspace named after you, so
that opening it boots this whole brain and puts you on the line. Its boot
protocol ships verbatim. Do not improvise it:
1. Open my Company Brain folder. 2. Read in order: CLAUDE.md → soul.md →
company-brain.md → the branches my access allows → the last few Daily-Notes/.
3. Any of the three core files missing? STOP and say so. 4. Then take my
request.
One name, one skill, one door. Never add a second entrance.
MODULE 3: MOVE MY CONTEXT IN. HARVEST: propose a migration table (source →
destination → copy or pointer), I approve it, you migrate ONE branch end to end,
show me, then continue. Copy, never cut: originals retire only after Module 5.
Live systems (booking, accounting, CRM) stay where they are and get registered as
POINTERS; the moment you copy a database you own a stale copy. Fresh: turn my SOPs
into Company/Playbooks/, seed one area end to end, then replicate. MILESTONE 1: I
can ask you anything about my business and you can find it. Do not set up team
permissions here; that is its own session, later.
MODULE 4: THE RHYTHMS. This is what makes it a brain instead of a filing cabinet.
- The daily close: a scheduled task, end of my working day: what happened, what
we learned, what shipped, what is open. Write it to Daily-Notes/.
- Call filing: recordings get transcribed, identified by who and what, and filed
to the right person or area, with the raw transcript stored once in
Company/Transcript-Vault/ and pointers everywhere else.
- The question inbox: anything nobody can answer from the brain goes to
Company/faq.md under Unanswered, immediately. Weekly, promote anything asked
twice into a Playbook or a standing rule.
MODULE 5: RE-ARCHITECT, THEN PROVE IT. Do not skip this. Having now read
everything, propose the most intelligent structure for THIS business, not the
template, as a before-and-after tree with your reasoning. I approve, you apply it
and update the INDEX. Write a postmortem to Daily-Notes/: what you learned, what
surprised you, what gaps remain, what you would improve about this process. Then
prove it: answer a real staff-level question from the Playbooks; run the negative
test, where a question about walled material must come back empty; and produce a
roll-up across the whole business. Passing all three means we are live.
OPTIONAL: GIVE ME HANDS. A brain that knows everything and can reach nothing
still leaves the work on me. When I am ready to connect the first live system,
start with the one that matches my bottleneck, walk me through it, and register it
in Company/connectors.md so you know it exists and route to it.
STANDING RULES, EVERY SESSION:
- Identity first. Nothing gets built before I confirm soul.md.
- Confirm before writing. Never delete: superseded goes to Archive/. Nothing
sends, publishes, spends, or creates an account without my explicit go.
- Read freely inside this folder; ask before every write.
- Every folder you create gets a one-paragraph README.
- Tag every fact CONFIRMED, INFERRED, or GAP. A brain that cannot tell what it
knows from what it guessed will eventually lie to me with confidence. Gaps are
my to-do list.
- One obvious home per thing. If you have to think about where something goes,
the structure is wrong. Fix the structure, do not create a second home.
- When I correct you, do not just apply it. File it. A correction I make twice
becomes a standing rule.
- Anything you cannot answer from the brain goes to Company/faq.md under
Unanswered.
- Any time we bring in a large new batch of context later, offer another
re-architecture pass. The structure follows the knowledge.
Start now: ask me which path.That prompt is long because it is doing the job a downloadable kit would otherwise do. Paste it once and you never touch it again; from then on you talk to your Chief of Staff by name.
While it runs, it will announce modules. Each one is a gate you approve before it moves on:
| When it says | It is doing this |
|---|---|
| Module 0 | Creating the folder tree and a README in every tier |
| Module 1 | Drafting and confirming your identity file |
| Module 2 | Naming itself, writing its charter, saving your core Skill |
| Module 3 | Moving your existing context in, one approved branch at a time |
| Module 4 | Installing the daily close, call filing, and the question inbox |
| Module 5 | Proposing a better structure, then proving the whole thing works |
Optional | Connecting a live tool so it can reach the outside world |
The rest of this page explains what each part of it does and why.
Nine things, and each one exists to answer a specific question your AI will have.
| Where | What it is |
|---|---|
soul.md | Who you are, how the business is owned, what you sell, your voice in your own verbatim lines, your red lines. The protected heart. Everything else is a claim checked against this file. Changed only with you, never auto-edited. |
company-brain.md | The front door. Your Chief of Staff's charter, and the INDEX, which is the map of everything else. Above the index line is owner-approved; below it your Chief of Staff maintains freely. |
CLAUDE.md | The system file you never open. Boot order, filing rules, write guardrails, and the hard gates. It loads every session automatically. |
Company/ | Everything shared. Playbooks are how you do things, SOPs are how you build things, roles say what each seat owns, standing rules are corrections that became law, and faq.md is the question inbox. |
People/ | One folder per human. Their charter, their own daily notes, their calls. Scoped to them and you. It is a desk, not surveillance. |
AI-Team/ | The AI specialists working under your Chief of Staff, one folder each, plus the hiring protocol. This is the other half of your org chart, and the half that grows fastest. |
Private/ | Yours only. Payroll, banking, personnel matters, leases. Naming the exclusion out loud is how the team trusts everything else. |
Daily-Notes/ | One file per working day, written live, append-only. Decisions, relationship touches, revenue events, learnings. |
Archive/ | Superseded material, kept. You will want the old version exactly once, and it will matter. |
Two rules about this structure carry more weight than the structure itself.
Every folder gets a one-paragraph README. What it is, why it exists. This is the single highest-leverage habit for making a brain usable by anyone who did not build it, human or AI. A folder name carries no context. "Clients" tells you nothing about what belongs in it, what does not, and what happens when someone leaves.
One obvious home per thing. If you have to think about where something goes, the structure is wrong. Fix the structure. Do not create a second home. Duplicates are how brains rot.
Nothing gets built until the soul file is written and you confirm it out loud.
This ordering is not ceremony. Every other file in the brain is a claim, and claims need something to be checked against. Get identity wrong and you have built a very organized machine for producing work that does not sound like you.
Five questions, answered one at a time:
Two pieces of advice that will save you a rewrite.
Do not pre-write it. Voice answers captured in the moment beat polished prose written the night before. The soul file should sound like you talk, because its job is to teach a machine how you talk.
Answer with documents where you can. "Who are you?" is better answered by attaching your operating agreements than by typing a paragraph. Let it draft from the source and correct what it inferred. Faster, and the provenance is real. That is why the prompt asks HARVEST or INTERVIEW as its very first question.
Name it. Atlas is the default, and you can call it anything.
The name is not decoration. It becomes the boot ritual. Saying it loads the whole protocol in one move: identity, charter, map, rules. One word, entire context. Two syllables typed do more setup work than a page of instructions would.
Then the charter, built from three answers: your goal, your org chart, and your bottleneck. Goal is the one thing you would hand off tomorrow. Org chart is everyone on the team today, human and AI, and who owns what. Bottleneck is where the work chokes. From those three, your Chief of Staff writes its own operating rules and names the first specialist it would hire against the bottleneck.
Finally, the part people skip: save it as a Skill. One file in your workspace, named after your Chief of Staff, holding a boot protocol that never changes. Open it and the whole brain loads. Every session, identically, forever.
One name, one Skill, one door. No alternate prompts, no side workflows, no quick way in. Every convenience entrance you add is a place the protocol silently does not run.
If you already run a business, you have context. It is in Drive folders, old proposals, meeting notes, and a decade of email. The instinct is to clean it up first. Do not.
Index before you organize. Do not sort your mess by hand, and do not let the AI reorganize on first contact. The order is: index everything into a source map where nothing moves, confirm what it inferred, then migrate branch by branch on your approval. The librarian learns the library before rearranging it.
Four rules make migration safe:
The finish line for this stage is one sentence: you can ask your AI anything about your business and it can find it. That is the milestone worth stopping to notice, and it is deliberately selfish. Make it undeniably useful for you before anyone else touches it. Permissions, team onboarding, and rollout are all easier when you are demonstrating something that already works.
This is the part that separates a brain from a filing cabinet, and it is the part most people skip.
The daily close. One scheduled task at the end of your working day: what happened, what we learned, what shipped, what is open. Miss the habit and you have a folder. Keep it and you have something that is smarter every Friday than it was Monday.
Call filing. Recordings get transcribed, identified by who and what, and filed to the right person or area. The raw transcript lives once, in the vault, and everything else holds a pointer. Sensitive one-on-ones file to that person's own desk, not to a shared note.
The question inbox. Every question nobody can answer from the brain lands in faq.md under Unanswered, the moment it is asked. Weekly, anything asked twice gets promoted into a playbook or a standing rule. New hires are the best source of undocumented knowledge you will ever have; they ask a thousand questions in week one, and every answer that currently lives only in someone's head is captured for free.
The folder is the memory, not the chat. Anything decided, learned, or corrected that lives only in a conversation is already half lost. Saying "file that" is the single reflex that separates operators whose brains compound from operators whose brains plateau.
Do not skip Module 5. The template got you here; this is where the brain becomes yours.
Re-architecture. Having now read everything you own, your Chief of Staff proposes the most intelligent structure for your actual business, as a before-and-after tree with its reasoning. Multi-entity, holdco, several locations, whatever is true. You approve, it applies, the map updates. Any time you bring in a large new batch of context later, run this again. The structure follows the knowledge.
Postmortem. What it learned, what surprised it, what gaps remain, what it would improve about the process. The answers improve the brain and the process at the same time.
Then prove it, three ways. Answer a real staff-level question from the playbooks. Run a roll-up across the whole business. And run the negative test: ask from a login that should not have access and confirm the answer comes back empty. Trust the walls only after you have tried to walk through them.
That last one is the part almost nobody does, and it is the only one that actually tells you whether your permissions work.
Karpathy's framing for this, in the same talk, is the one worth keeping. He argues for partial autonomy over full agents, and for what he calls an autonomy slider: a dial you move deliberately as trust is earned, the way Tesla's Autopilot exposes levels rather than one switch. His image for it is the Iron Man suit, an augmentation you wear and control, rather than a robot you release. Reads free, writes gated, sends never without you. That is not caution for its own sake. It is what makes it safe to give the thing more rope later.
Now run that test from earlier. Ask Claude for the same post you asked for before you built any of this, and put the two side by side. Same request. The only variable that changed is what it knows about you, and that is the whole thesis of this page sitting in front of you as evidence rather than a claim.
There is one gap left. A brain that knows everything and can still only produce drafts leaves the work on you. Connectors close it: MCP is the standard that lets Claude reach your actual tools.
Connect whichever one matches your bottleneck, and register it in Company/connectors.md so your Chief of Staff knows it exists and routes to it.
The one worth wiring early is Google. Once the brain lives in Drive, connecting Google through MCP means Claude can reach it from anywhere rather than only from the machine with the synced folder, including from Claude on your phone, or from a scheduled job that runs while your laptop is shut. Gmail and Calendar in the same connection are what turn "it knows my business" into "it handled my morning," because inbox triage and calendar defence are the two jobs almost everyone wants first, and neither is possible from files alone.
Worth being precise about which layer does what, because they are easy to confuse: Drive for desktop syncs the files, and the Google MCP connection lets Claude read and update them without that sync. You want both eventually. Local sync is what makes the work fast; the API connection is what makes the brain reachable when you are not at your desk.
Once a connector is live, the natural next step is an AI hire whose whole lane is that job: one specialist reporting to your Chief of Staff, whose tools are the Skills and the connection you just made. It reads the same soul file everyone else does, so it works in your voice by default rather than being told the voice every time.
That is what AI-Team/ is for, and the hiring protocol is one repeatable pattern: name the bottleneck it removes, give it one lane that does not overlap anyone else's, assign its Skills, write its onboarding doc, set its gates, and log the hire. Then the fifth step becomes possible, which is the whole point of the previous four. The work runs on a cadence instead of on your attention.
A solo owner is complete with a Chief of Staff alone. Never force a hire, and never hire against a bottleneck you do not actually have.
Everything below comes from running this daily, on a real business. None of it is theory.
These are what daily reality teaches past the basics. None are required on day one. Adopt them as you grow into the system.
The thread through all nine is the same move: take something that lives in judgment and make it live in the system. Orientation becomes a ritual, reasoning becomes a log, mistakes become lessons, taste becomes a gate. That is what makes a brain compound instead of just accumulate.
Boris Cherny created Claude Code at Anthropic. In his talk on practical tips for using Claude Code, he makes a point worth internalizing before any of the tips: the leverage is not exotic tooling or running twenty sessions at once. It is a small number of disciplined habits, and he describes his own usage as fairly ordinary. Here they are, with your Company Brain standing in for his codebase.
claude -p "your question" answers and exits, and it is the primitive underneath every scheduled automation you will ever build.Nobody teaches them, and they are half the mastery. Escape is the always-safe interrupt: stop it mid-work, correct one line of a twenty-line plan, have it redo. The pound sign (#) files a correction into memory, which is the difference between fixing something once and fixing it every time.
Every word the prompt uses, in one place. If you are adapting this format to your own business, or explaining it to someone else, this is the shared language it runs on.
| Term | What it is |
|---|---|
soul.md | Identity canon. Who you are, how the business is owned, what you sell, your voice in verbatim lines, your red lines. Owner-gated: it changes only in a direct conversation with you, never on its own. |
company-brain.md | The front door. Your Chief of Staff's charter, plus the INDEX, which is the map of everything else. Above the index line is yours to approve; below it, it maintains freely. |
CLAUDE.md | The system file you never open. Boot order, filing rules, write guardrails, hard gates. Loads automatically every session. |
README.md | One paragraph in every folder: what it is and why it exists. This single habit is what makes the brain usable by anyone who did not build it. |
| Term | What it is |
|---|---|
Company/ | Shared ground. Everything that is true for the whole business. |
Company/Playbooks/ | How you do a recurring thing. The steps for running the thing you already run. |
Company/SOPs/ | How you build a new thing. Standards that apply when creating rather than operating. |
Company/roles/ | What each seat owns, human or AI. |
Company/standing-rules/ | Corrections that became law. A correction you make twice belongs here. |
Company/skills/ | The jobs your team can run, as Skill files. |
Company/faq.md | The question inbox. Anything nobody could answer from the brain lands here the moment it is asked. |
Company/sources-map.md | Where knowledge actually lives. One row per external source, so it routes to the source instead of trusting a stale copy. |
Company/connectors.md | Which live systems it may reach, and how. |
Company/Transcript-Vault/ | Raw call transcripts, stored once. Everything else holds a pointer to them. |
Company/Vendors/ | Who you pay, for what, and the terms. |
People/<name>/ | One desk per human: their charter, their own daily notes, their calls. Scoped to them and you. |
AI-Team/ | The AI specialists working under your Chief of Staff, one lane each, plus the hiring protocol. |
Private/ | Owner only. Payroll, banking, personnel matters, leases. |
Daily-Notes/ | One file per working day, written live, append-only. |
Archive/ | Superseded material, kept. Nothing is ever deleted. |
| Term | What it means |
|---|---|
| Chief of Staff | The one agent you talk to. It reads the brain, then either does the job or routes it to a specialist. Named by you; Atlas is the default. |
Conductor | The role it plays during setup only. It runs the modules with you, one gate at a time, rather than doing everything at once. |
| The one door | Your core Skill, saved in your workspace and named after your Chief of Staff. Opening it boots the whole brain. Never add a second entrance. |
| Boot protocol | The fixed read order at the start of every session: CLAUDE.md, soul.md, company-brain.md, your branches, recent daily notes. It ships verbatim so every session starts identically. |
| RULE ZERO | One brain only. If a brain already exists, adopt it and fill it in place. Never scaffold a second. |
| HARVEST / INTERVIEW | The two setup paths. Harvest reads your existing documents and drafts from them; interview asks you five questions. Most people are harvest. |
| CONFIRMED / INFERRED / GAP | Provenance tags on every fact. Confirmed means you said so. Inferred means it worked it out and you have not checked. Gap means nobody knows yet, which makes gaps your to-do list. |
Pointer | A reference to a live system rather than a copy of its data. Booking, accounting, and CRM stay where they are; copy a database and you own a stale copy. |
| Milestone 1 | The first finish line: you can ask anything about your business and it finds the answer. |
| The daily close | A scheduled end-of-day task that writes what happened, what was learned, what shipped, and what is open. |
| The negative test | Asking from a login that should not have access and confirming the answer comes back empty. |
Postmortem | What it learned, what surprised it, what gaps remain, what it would improve. Written after a milestone, to Daily-Notes/. |
Re-architecture | Having read everything, proposing a better structure than the template as a before-and-after tree. Run again after any large new batch of context. |
MCP | Model Context Protocol, the standard that lets Claude reach a live tool. A connector is one such connection. |
Both work. Claude Code is the better home for a Company Brain because it reads and writes real files on your machine at full speed, and because scheduled tasks run there. Desktop and Cowork read the same folder.
Not to start, and you can add it at any point without moving anything. But it is the intended architecture rather than an optional extra: Drive for desktop makes the cloud folder be your local folder, so the truth lives in the cloud while the work stays local and full speed. It is also what makes the brain survive a dead laptop and what makes team permissions possible later. Set up Google Workspace with a Shared Drive before anyone else joins you.
Yes. Obsidian points at the same folder and gives you graph view, backlinks, and full-text search over the same markdown files, with no migration and no second copy. Local for the work, Drive for the truth, Obsidian for seeing it. One folder, three views.
Install is about ten minutes. The soul file takes fifteen to thirty. If you are harvesting existing context, the migration sprint takes one to two hours and can span days. You do not have to do it in one sitting.
The prompt checks first and adopts what exists rather than building beside it. That is RULE ZERO. If it finds two candidates it stops and asks you which is canonical.
The folder will. It is markdown. The specific commands here are Claude Code, but the artifact you are building is plain files, which is the entire reason to build it this way.
No. Identity, voice, and pricing change only in a direct conversation with you. Everything else it maintains freely below the index line.
Team permissions and the teammate rollout, which are deliberately a separate session, and the deeper migration and multi-entity work. Start solo. Make it undeniably useful for you first.
The whole folder tree, a README in every folder, templates for the core files, your Chief of Staff Skill and the setup prompt. Unzip it, open it in Claude Code and paste the prompt.
Download the kit (ZIP)The same prompt from this page, in one file. Paste it into Claude Code inside an empty folder and answer the questions.
Download the promptBuild the folder. Confirm the soul file. Set the daily close.
Everything after that compounds on its own.